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Advanced RNA-Seq Analysis

Contains all presentation materials, hands-on cook book manuals and scripts used in our Advanced RNA-Seq analysis course, conducted at the NIH Bethesda campus.
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  T Name Size Last modified
Apa May2018
Hands-on tutorial for analyzing alternative polyadenylation site usage analysis
40.33 KB 2018-05-18
Apa May2018 PPT
1.11 MB 2018-05-19
Arnaseq Manual Sept2018
3.70 MB 2018-09-25
Ballgown - tutorial
216.56 KB 2018-05-19
BP Trinity
2.30 MB 2018-09-26
CircRNA BP
5.07 MB 2018-09-26
CircRNA PPT
5.07 MB 2018-05-19
Circular Rna May 2018
Hands-on tutorial for identifying and analyzing circular RNAs
48.39 KB 2018-05-18
Fusion Genes - PPT
38.17 MB 2018-09-26
GATK Pipeline - Tutorial
21.69 KB 2018-05-19
Hisat StringTie BallGown - PPT
3.25 MB 2018-05-19
Hisat2 - Tutorial
329.36 KB 2018-05-19
Laptop Setup Sept2018
904.42 KB 2018-09-25
Linux Basics May2018
Hands-on tutorial for Linux Basics
95.74 KB 2018-05-18
Overview Of RNA Seq Analysis
2.68 MB 2018-09-25
R Code
R code
3.62 KB 2018-05-19
RNA-Seq Network May 2018 - Tutorial
Hands-on training material for network based analysis of NGS data.
2.88 MB 2018-05-19
Rnaseq Networks May 2018 - PPT
3.22 MB 2018-05-19
STAR Fusion - Tutorial
16.57 KB 2018-05-19
STAR Fusion Script
456 B 2018-05-19
Trinity - PPT
1,017.45 KB 2018-05-19
Trinity RNAseq - Tutorial
20.01 KB 2018-05-19
Variant Calling - PPT
7.20 MB 2018-09-26
Variant calling - script
4.16 KB 2018-05-19
Viral May2018
Hands-on tutorial for viral integration analysis
61.33 KB 2018-05-18

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